Carnation DB

Dca1013.1

Annotation

7-exons
f-1
sp|D7UAF4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0015g00260#unknown#0F0P0C
Os01t0762400-00 Similar to Import inner membrane translocase subunit TIM50.
Repeat List (scaffold1028)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1013.1	47	258	258	59.68	212	60	8e-82
Target_name	Start	End	Length	Cov(%)
sp\|D7UAF4_VITVI	102	357	371	69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1013.1	44	258	258	59.3	215	59	4e-82
Target_name	Start	End	Length	Cov(%)
Os01t0762400-00	89	347	362	71.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1028	Augustus	mRNA	54785	58457	.	-	.	ID=Dca1013.1;Parent=Dca1013
scaffold1028	Augustus	exon	54785	54891	.	-	.	ID=Dca1013.1.exon1;Parent=Dca1013.1
scaffold1028	Augustus	exon	55020	55179	.	-	.	ID=Dca1013.1.exon2;Parent=Dca1013.1
scaffold1028	Augustus	exon	55607	55705	.	-	.	ID=Dca1013.1.exon3;Parent=Dca1013.1
scaffold1028	Augustus	exon	55799	55903	.	-	.	ID=Dca1013.1.exon4;Parent=Dca1013.1
scaffold1028	Augustus	exon	56328	56396	.	-	.	ID=Dca1013.1.exon5;Parent=Dca1013.1
scaffold1028	Augustus	exon	57443	57540	.	-	.	ID=Dca1013.1.exon6;Parent=Dca1013.1
scaffold1028	Augustus	exon	58319	58457	.	-	.	ID=Dca1013.1.exon7;Parent=Dca1013.1