Dca10343.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVW0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g07010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1451)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10343.1 |
17 |
253 |
279 |
31.54 |
237 |
32 |
8e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVW0_ARATH |
27 |
301 |
1413 |
19.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10343.1 |
35 |
196 |
279 |
20.43 |
162 |
31 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
38 |
225 |
237 |
79.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1451 |
Augustus |
mRNA |
19009 |
19919 |
. |
- |
. |
ID=Dca10343.1;Parent=Dca10343 |
| scaffold1451 |
Augustus |
exon |
19009 |
19512 |
. |
- |
. |
ID=Dca10343.1.exon1;Parent=Dca10343.1 |
| scaffold1451 |
Augustus |
exon |
19584 |
19919 |
. |
- |
. |
ID=Dca10343.1.exon2;Parent=Dca10343.1 |
