Carnation DB

Dca10404.1

Annotation

7-exons
f-1
sp|D7SH86_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g00140#GO:0003676;GO:0000166#2F0P0C
AT3G56510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:20944348-20946235 REVERSE LENGTH=257
Repeat List (scaffold1455)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10404.1	3	218	220	63.63	216	65	6e-77
Target_name	Start	End	Length	Cov(%)
sp\|D7SH86_VITVI	127	344	344	63.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10404.1	4	217	220	57.27	214	59	5e-69
Target_name	Start	End	Length	Cov(%)
AT3G56510.1	43	257	257	83.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1455	Augustus	mRNA	50040	53894	.	-	.	ID=Dca10404.1;Parent=Dca10404
scaffold1455	Augustus	exon	50040	50066	.	-	.	ID=Dca10404.1.exon1;Parent=Dca10404.1
scaffold1455	Augustus	exon	50163	50309	.	-	.	ID=Dca10404.1.exon2;Parent=Dca10404.1
scaffold1455	Augustus	exon	51168	51298	.	-	.	ID=Dca10404.1.exon3;Parent=Dca10404.1
scaffold1455	Augustus	exon	51393	51482	.	-	.	ID=Dca10404.1.exon4;Parent=Dca10404.1
scaffold1455	Augustus	exon	51923	51990	.	-	.	ID=Dca10404.1.exon5;Parent=Dca10404.1
scaffold1455	Augustus	exon	52082	52145	.	-	.	ID=Dca10404.1.exon6;Parent=Dca10404.1
scaffold1455	Augustus	exon	53759	53894	.	-	.	ID=Dca10404.1.exon7;Parent=Dca10404.1