Dca10409.1
Annotation
- 2-exons
- f-1
- sp|O82216_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23880#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1456)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10409.1 |
3 |
102 |
205 |
22.43 |
100 |
46 |
6e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O82216_ARATH |
168 |
267 |
1216 |
8.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10409.1 |
115 |
197 |
205 |
13.65 |
83 |
34 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
417 |
499 |
626 |
13.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1456 |
Augustus |
mRNA |
8241 |
10295 |
. |
- |
. |
ID=Dca10409.1;Parent=Dca10409 |
| scaffold1456 |
Augustus |
exon |
8241 |
8555 |
. |
- |
. |
ID=Dca10409.1.exon1;Parent=Dca10409.1 |
| scaffold1456 |
Augustus |
exon |
9993 |
10295 |
. |
- |
. |
ID=Dca10409.1.exon2;Parent=Dca10409.1 |
