Dca10484.1
Annotation
- 4-exons
- f-1
- sp|Q6L432_SOLDE#Disease resistance protein, putative#Solanum demissum (Wild potato)#ORFNames=SDM1_26t00003#GO:0043531;GO:0006952#1F1P0C
- Repeat List (scaffold146)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10484.1 |
694 |
1092 |
1093 |
14.27 |
399 |
38 |
6e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L432_SOLDE |
1717 |
2118 |
2544 |
15.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10484.1 |
766 |
1092 |
1093 |
10.33 |
327 |
34 |
5e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0564800-01 |
178 |
507 |
974 |
33.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold146 |
Augustus |
mRNA |
167057 |
172415 |
. |
- |
. |
ID=Dca10484.1;Parent=Dca10484 |
| scaffold146 |
Augustus |
exon |
167057 |
168255 |
. |
- |
. |
ID=Dca10484.1.exon1;Parent=Dca10484.1 |
| scaffold146 |
Augustus |
exon |
168573 |
169511 |
. |
- |
. |
ID=Dca10484.1.exon2;Parent=Dca10484.1 |
| scaffold146 |
Augustus |
exon |
169890 |
170815 |
. |
- |
. |
ID=Dca10484.1.exon3;Parent=Dca10484.1 |
| scaffold146 |
Augustus |
exon |
172198 |
172415 |
. |
- |
. |
ID=Dca10484.1.exon4;Parent=Dca10484.1 |
