Carnation DB

Dca10504.1

Annotation

5-exons
f-1
sp|A2I5F1_BETVU#Transposon-like protein#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
Repeat List (scaffold1461)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10504.1	5	476	505	61.18	472	63	7e-177
Target_name	Start	End	Length	Cov(%)
sp\|A2I5F1_BETVU	488	984	1399	35.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10504.1	1	200	505	18.21	200	46	9e-51
Target_name	Start	End	Length	Cov(%)
Os08t0208400-02	590	792	829	24.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1461	Augustus	mRNA	23097	26366	.	-	.	ID=Dca10504.1;Parent=Dca10504
scaffold1461	Augustus	exon	23097	23503	.	-	.	ID=Dca10504.1.exon1;Parent=Dca10504.1
scaffold1461	Augustus	exon	25003	25234	.	-	.	ID=Dca10504.1.exon2;Parent=Dca10504.1
scaffold1461	Augustus	exon	25312	25411	.	-	.	ID=Dca10504.1.exon3;Parent=Dca10504.1
scaffold1461	Augustus	exon	25508	25816	.	-	.	ID=Dca10504.1.exon4;Parent=Dca10504.1
scaffold1461	Augustus	exon	25897	26366	.	-	.	ID=Dca10504.1.exon5;Parent=Dca10504.1