Carnation DB

Dca10667.1

Annotation

45-exons
f-1
sp|B9MYH6_POPTR#DNA polymerase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_594813#GO:0003677;GO:0003887;GO:0000166;GO:0008270;GO:0006260#4F1P0C
Repeat List (scaffold147)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10667.1	1	2101	2102	72.59	2101	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MYH6_POPTR	99	2219	2221	95.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10667.1	1	2099	2102	66.74	2099	66	0
Target_name	Start	End	Length	Cov(%)
AT1G08260.1	98	2156	2161	95.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold147	Augustus	mRNA	175657	195849	.	+	.	ID=Dca10667.1;Parent=Dca10667
scaffold147	Augustus	exon	175657	175746	.	+	.	ID=Dca10667.1.exon1;Parent=Dca10667.1
scaffold147	Augustus	exon	176431	176591	.	+	.	ID=Dca10667.1.exon2;Parent=Dca10667.1
scaffold147	Augustus	exon	176688	177102	.	+	.	ID=Dca10667.1.exon3;Parent=Dca10667.1
scaffold147	Augustus	exon	177931	178017	.	+	.	ID=Dca10667.1.exon4;Parent=Dca10667.1
scaffold147	Augustus	exon	178107	178241	.	+	.	ID=Dca10667.1.exon5;Parent=Dca10667.1
scaffold147	Augustus	exon	178641	178763	.	+	.	ID=Dca10667.1.exon6;Parent=Dca10667.1
scaffold147	Augustus	exon	179105	179188	.	+	.	ID=Dca10667.1.exon7;Parent=Dca10667.1
scaffold147	Augustus	exon	179845	180009	.	+	.	ID=Dca10667.1.exon8;Parent=Dca10667.1
scaffold147	Augustus	exon	180083	180259	.	+	.	ID=Dca10667.1.exon9;Parent=Dca10667.1
scaffold147	Augustus	exon	180750	180863	.	+	.	ID=Dca10667.1.exon10;Parent=Dca10667.1
scaffold147	Augustus	exon	181063	181167	.	+	.	ID=Dca10667.1.exon11;Parent=Dca10667.1
scaffold147	Augustus	exon	182515	182633	.	+	.	ID=Dca10667.1.exon12;Parent=Dca10667.1
scaffold147	Augustus	exon	182714	182855	.	+	.	ID=Dca10667.1.exon13;Parent=Dca10667.1
scaffold147	Augustus	exon	182942	183036	.	+	.	ID=Dca10667.1.exon14;Parent=Dca10667.1
scaffold147	Augustus	exon	183382	183487	.	+	.	ID=Dca10667.1.exon15;Parent=Dca10667.1
scaffold147	Augustus	exon	183571	183650	.	+	.	ID=Dca10667.1.exon16;Parent=Dca10667.1
scaffold147	Augustus	exon	183735	183911	.	+	.	ID=Dca10667.1.exon17;Parent=Dca10667.1
scaffold147	Augustus	exon	184019	184106	.	+	.	ID=Dca10667.1.exon18;Parent=Dca10667.1
scaffold147	Augustus	exon	184844	184924	.	+	.	ID=Dca10667.1.exon19;Parent=Dca10667.1
scaffold147	Augustus	exon	185022	185165	.	+	.	ID=Dca10667.1.exon20;Parent=Dca10667.1
scaffold147	Augustus	exon	185516	185611	.	+	.	ID=Dca10667.1.exon21;Parent=Dca10667.1
scaffold147	Augustus	exon	185799	185999	.	+	.	ID=Dca10667.1.exon22;Parent=Dca10667.1
scaffold147	Augustus	exon	186290	186344	.	+	.	ID=Dca10667.1.exon23;Parent=Dca10667.1
scaffold147	Augustus	exon	186419	186561	.	+	.	ID=Dca10667.1.exon24;Parent=Dca10667.1
scaffold147	Augustus	exon	186660	187090	.	+	.	ID=Dca10667.1.exon25;Parent=Dca10667.1
scaffold147	Augustus	exon	187581	187728	.	+	.	ID=Dca10667.1.exon26;Parent=Dca10667.1
scaffold147	Augustus	exon	187811	188002	.	+	.	ID=Dca10667.1.exon27;Parent=Dca10667.1
scaffold147	Augustus	exon	188106	188180	.	+	.	ID=Dca10667.1.exon28;Parent=Dca10667.1
scaffold147	Augustus	exon	189063	189253	.	+	.	ID=Dca10667.1.exon29;Parent=Dca10667.1
scaffold147	Augustus	exon	189353	189416	.	+	.	ID=Dca10667.1.exon30;Parent=Dca10667.1
scaffold147	Augustus	exon	190296	190360	.	+	.	ID=Dca10667.1.exon31;Parent=Dca10667.1
scaffold147	Augustus	exon	190948	191080	.	+	.	ID=Dca10667.1.exon32;Parent=Dca10667.1
scaffold147	Augustus	exon	191193	191294	.	+	.	ID=Dca10667.1.exon33;Parent=Dca10667.1
scaffold147	Augustus	exon	191395	191478	.	+	.	ID=Dca10667.1.exon34;Parent=Dca10667.1
scaffold147	Augustus	exon	191688	191762	.	+	.	ID=Dca10667.1.exon35;Parent=Dca10667.1
scaffold147	Augustus	exon	192267	192308	.	+	.	ID=Dca10667.1.exon36;Parent=Dca10667.1
scaffold147	Augustus	exon	192416	192678	.	+	.	ID=Dca10667.1.exon37;Parent=Dca10667.1
scaffold147	Augustus	exon	192782	192830	.	+	.	ID=Dca10667.1.exon38;Parent=Dca10667.1
scaffold147	Augustus	exon	193108	193268	.	+	.	ID=Dca10667.1.exon39;Parent=Dca10667.1
scaffold147	Augustus	exon	193348	193414	.	+	.	ID=Dca10667.1.exon40;Parent=Dca10667.1
scaffold147	Augus-PASA	exon	194160	194294	.	+	.	ID=Dca10667.1.exon41;Parent=Dca10667.1
scaffold147	Augus-PASA	exon	194490	194660	.	+	.	ID=Dca10667.1.exon42;Parent=Dca10667.1
scaffold147	Augus-PASA	exon	194746	194955	.	+	.	ID=Dca10667.1.exon43;Parent=Dca10667.1
scaffold147	Augus-PASA	exon	195298	195404	.	+	.	ID=Dca10667.1.exon44;Parent=Dca10667.1
scaffold147	Augus-PASA	exon	195489	195849	.	+	.	ID=Dca10667.1.exon45;Parent=Dca10667.1