Carnation DB

Dca1079.1

Annotation

7-exons
f-1
sp|D7TC91_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g00400#GO:0046872#1F0P0C
AT3G43230.1 | Symbols: | RING/FYVE/PHD-type zinc finger family protein | chr3:15207776-15209599 FORWARD LENGTH=485
Repeat List (scaffold103)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1079.1	253	724	724	47.65	472	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TC91_VITVI	1	475	475	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1079.1	295	723	724	43.09	429	72	0
Target_name	Start	End	Length	Cov(%)
AT3G43230.1	53	484	485	89.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold103	Augustus	mRNA	157735	162198	.	+	.	ID=Dca1079.1;Parent=Dca1079
scaffold103	Augustus	exon	157735	157743	.	+	.	ID=Dca1079.1.exon1;Parent=Dca1079.1
scaffold103	Augustus	exon	157963	158509	.	+	.	ID=Dca1079.1.exon2;Parent=Dca1079.1
scaffold103	Augustus	exon	158927	159123	.	+	.	ID=Dca1079.1.exon3;Parent=Dca1079.1
scaffold103	Augustus	exon	159554	160393	.	+	.	ID=Dca1079.1.exon4;Parent=Dca1079.1
scaffold103	Augus-PASA	exon	160861	161061	.	+	.	ID=Dca1079.1.exon5;Parent=Dca1079.1
scaffold103	Augus-PASA	exon	161454	161649	.	+	.	ID=Dca1079.1.exon6;Parent=Dca1079.1
scaffold103	Augus-PASA	exon	162014	162198	.	+	.	ID=Dca1079.1.exon7;Parent=Dca1079.1