Dca10794.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold14778)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10794.1 |
163 |
296 |
316 |
18.98 |
134 |
44 |
9e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
286 |
424 |
964 |
14.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10794.1 |
167 |
239 |
316 |
8.54 |
73 |
36 |
8e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
688 |
762 |
1401 |
5.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14778 |
Augustus |
mRNA |
799 |
3296 |
. |
- |
. |
ID=Dca10794.1;Parent=Dca10794 |
| scaffold14778 |
Augustus |
exon |
799 |
1253 |
. |
- |
. |
ID=Dca10794.1.exon1;Parent=Dca10794.1 |
| scaffold14778 |
Augustus |
exon |
2801 |
3296 |
. |
- |
. |
ID=Dca10794.1.exon2;Parent=Dca10794.1 |
