Dca10796.1
Annotation
- 4-exons
- f-1
- sp|F4NCH1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003676;GO:0008270#2F0P0C
- sp|Q2HX36_IPOBA#LINE-type retrotransposon LIb DNA, complete sequence, Insertion at the S10 site#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold1478)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10796.1 |
9 |
412 |
719 |
26.56 |
404 |
44 |
1e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH1_BETVU |
85 |
526 |
678 |
65.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10796.1 |
43 |
252 |
719 |
9.17 |
210 |
32 |
7e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G01050.1 |
61 |
267 |
515 |
40.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1478 |
Augustus |
mRNA |
27736 |
32689 |
. |
- |
. |
ID=Dca10796.1;Parent=Dca10796 |
| scaffold1478 |
Augustus |
exon |
27736 |
28055 |
. |
- |
. |
ID=Dca10796.1.exon1;Parent=Dca10796.1 |
| scaffold1478 |
Augustus |
exon |
29410 |
29443 |
. |
- |
. |
ID=Dca10796.1.exon2;Parent=Dca10796.1 |
| scaffold1478 |
Augustus |
exon |
30748 |
30857 |
. |
- |
. |
ID=Dca10796.1.exon3;Parent=Dca10796.1 |
| scaffold1478 |
Augustus |
exon |
30994 |
32689 |
. |
- |
. |
ID=Dca10796.1.exon4;Parent=Dca10796.1 |
