Carnation DB

Dca10914.1

Annotation

5-exons
f-1
sp|E7BQD5_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold1483)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10914.1	105	262	262	37.02	158	61	3e-49
Target_name	Start	End	Length	Cov(%)
sp\|E7BQD5_SILLA	480	640	1475	10.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10914.1	168	256	262	11.45	89	34	1e-08
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	190	276	707	12.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1483	Augustus	mRNA	6322	12473	.	-	.	ID=Dca10914.1;Parent=Dca10914
scaffold1483	Augustus	exon	6322	6343	.	-	.	ID=Dca10914.1.exon1;Parent=Dca10914.1
scaffold1483	Augustus	exon	9618	10073	.	-	.	ID=Dca10914.1.exon2;Parent=Dca10914.1
scaffold1483	Augustus	exon	10997	11093	.	-	.	ID=Dca10914.1.exon3;Parent=Dca10914.1
scaffold1483	Augustus	exon	11628	11739	.	-	.	ID=Dca10914.1.exon4;Parent=Dca10914.1
scaffold1483	Augustus	exon	12372	12473	.	-	.	ID=Dca10914.1.exon5;Parent=Dca10914.1