Dca10972.1
Annotation
- 3-exons
- f-1
- sp|Q9FWG3_ORYSJ#Putative gag/pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0015I11.24#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1487)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10972.1 |
10 |
1135 |
1139 |
46.09 |
1126 |
44 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FWG3_ORYSJ |
149 |
1327 |
1417 |
83.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10972.1 |
911 |
1134 |
1139 |
7.46 |
224 |
38 |
3e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1155 |
1379 |
1428 |
15.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1487 |
Augustus |
mRNA |
299 |
4046 |
. |
- |
. |
ID=Dca10972.1;Parent=Dca10972 |
| scaffold1487 |
Augustus |
exon |
299 |
964 |
. |
- |
. |
ID=Dca10972.1.exon1;Parent=Dca10972.1 |
| scaffold1487 |
Augustus |
exon |
1188 |
1979 |
. |
- |
. |
ID=Dca10972.1.exon2;Parent=Dca10972.1 |
| scaffold1487 |
Augustus |
exon |
2085 |
4046 |
. |
- |
. |
ID=Dca10972.1.exon3;Parent=Dca10972.1 |
