Dca11044.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1490)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11044.1 |
124 |
361 |
371 |
49.32 |
238 |
62 |
1e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
655 |
952 |
1553 |
19.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11044.1 |
1 |
134 |
371 |
32.34 |
134 |
72 |
1e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATCG00480.1 |
216 |
379 |
498 |
32.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1490 |
Augustus |
mRNA |
27346 |
28741 |
. |
- |
. |
ID=Dca11044.1;Parent=Dca11044 |
| scaffold1490 |
Augustus |
exon |
27346 |
27894 |
. |
- |
. |
ID=Dca11044.1.exon1;Parent=Dca11044.1 |
| scaffold1490 |
Augustus |
exon |
27988 |
28033 |
. |
- |
. |
ID=Dca11044.1.exon2;Parent=Dca11044.1 |
| scaffold1490 |
Augustus |
exon |
28121 |
28542 |
. |
- |
. |
ID=Dca11044.1.exon3;Parent=Dca11044.1 |
| scaffold1490 |
Augustus |
exon |
28643 |
28741 |
. |
- |
. |
ID=Dca11044.1.exon4;Parent=Dca11044.1 |
