Carnation DB

Dca11076.1

Annotation

6-exons
f-1
sp|D7TQC4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g02910#GO:0000166#1F0P0C
AT5G02740.1 | Symbols: | Ribosomal protein S24e family protein | chr5:616517-618267 FORWARD LENGTH=228
Repeat List (scaffold1492)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11076.1	30	228	228	39.03	199	45	7e-44
Target_name	Start	End	Length	Cov(%)
sp\|D7TQC4_VITVI	28	218	218	87.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11076.1	67	228	228	29.82	162	41	1e-30
Target_name	Start	End	Length	Cov(%)
AT5G02740.1	63	228	228	72.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1492	Augustus	mRNA	23771	28442	.	+	.	ID=Dca11076.1;Parent=Dca11076
scaffold1492	Augustus	exon	23771	23960	.	+	.	ID=Dca11076.1.exon1;Parent=Dca11076.1
scaffold1492	Augustus	exon	25186	25321	.	+	.	ID=Dca11076.1.exon2;Parent=Dca11076.1
scaffold1492	Augustus	exon	25774	25858	.	+	.	ID=Dca11076.1.exon3;Parent=Dca11076.1
scaffold1492	Augustus	exon	25938	25985	.	+	.	ID=Dca11076.1.exon4;Parent=Dca11076.1
scaffold1492	Augustus	exon	28122	28216	.	+	.	ID=Dca11076.1.exon5;Parent=Dca11076.1
scaffold1492	Augustus	exon	28310	28442	.	+	.	ID=Dca11076.1.exon6;Parent=Dca11076.1