Carnation DB

Dca11174.1

Annotation

7-exons
f-961
sp|B9HIP5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_564395#unknown#0F0P0C
AT3G06660.1 | Symbols: | PAPA-1-like family protein / zinc finger (HIT type) family protein | chr3:2103060-2104776 FORWARD LENGTH=427
Repeat List (scaffold1499)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11174.1	7	86	86	67.44	80	73	1e-31
Target_name	Start	End	Length	Cov(%)
sp\|B9HIP5_POPTR	343	422	422	18.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11174.1	3	77	86	65.11	75	75	2e-28
Target_name	Start	End	Length	Cov(%)
AT3G06660.1	343	417	427	17.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1499	Augustus	mRNA	85295	87464	.	+	.	ID=Dca11174.1;Parent=Dca11174
scaffold1499	Augustus	exon	85295	85480	.	+	.	ID=Dca11174.1.exon1;Parent=Dca11174.1
scaffold1499	Augustus	exon	85577	86105	.	+	.	ID=Dca11174.1.exon2;Parent=Dca11174.1
scaffold1499	Augustus	exon	86196	86243	.	+	.	ID=Dca11174.1.exon3;Parent=Dca11174.1
scaffold1499	Augustus	exon	86391	86485	.	+	.	ID=Dca11174.1.exon4;Parent=Dca11174.1
scaffold1499	Augustus	exon	86564	86653	.	+	.	ID=Dca11174.1.exon5;Parent=Dca11174.1
scaffold1499	Augustus	exon	86749	86876	.	+	.	ID=Dca11174.1.exon6;Parent=Dca11174.1
scaffold1499	Augustus	exon	87320	87464	.	+	.	ID=Dca11174.1.exon7;Parent=Dca11174.1