Carnation DB

Dca11232.1

Annotation

11-exons
f-1
sp|A9TB14_PHYPA#Predicted protein#Physcomitrella patens subsp patens (Moss)#ORFNames=PHYPADRAFT_220538#GO:0030131;GO:0030132;GO:0006886;GO:0016192#0F2P2C
sp|O23140_ARATH#AP-2 complex subunit mu-1#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At5g46630#GO:0030131;GO:0030132;GO:0006886;GO:0016192#0F2P2C
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11232.1	1	376	376	80.58	376	70	5e-164
Target_name	Start	End	Length	Cov(%)
sp\|A9TB14_PHYPA	1	439	439	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11232.1	1	89	376	22.87	89	97	2e-46
Target_name	Start	End	Length	Cov(%)
Os02t0690700-01	1	89	439	20.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augustus	mRNA	493014	497507	.	-	.	ID=Dca11232.1;Parent=Dca11232
scaffold15	Augustus	exon	493014	493094	.	-	.	ID=Dca11232.1.exon1;Parent=Dca11232.1
scaffold15	Augustus	exon	493180	493224	.	-	.	ID=Dca11232.1.exon2;Parent=Dca11232.1
scaffold15	Augustus	exon	493311	493425	.	-	.	ID=Dca11232.1.exon3;Parent=Dca11232.1
scaffold15	Augustus	exon	493520	493662	.	-	.	ID=Dca11232.1.exon4;Parent=Dca11232.1
scaffold15	Augustus	exon	493797	493887	.	-	.	ID=Dca11232.1.exon5;Parent=Dca11232.1
scaffold15	Augustus	exon	494011	494127	.	-	.	ID=Dca11232.1.exon6;Parent=Dca11232.1
scaffold15	Augustus	exon	494631	494769	.	-	.	ID=Dca11232.1.exon7;Parent=Dca11232.1
scaffold15	Augustus	exon	494919	494967	.	-	.	ID=Dca11232.1.exon8;Parent=Dca11232.1
scaffold15	Augustus	exon	495053	495142	.	-	.	ID=Dca11232.1.exon9;Parent=Dca11232.1
scaffold15	Augustus	exon	496516	496693	.	-	.	ID=Dca11232.1.exon10;Parent=Dca11232.1
scaffold15	Augustus	exon	497425	497507	.	-	.	ID=Dca11232.1.exon11;Parent=Dca11232.1