Carnation DB

Dca11235.1

Annotation

7-exons
f-1
sp|F6HTA3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g01110#unknown#0F0P0C
AT2G35360.1 | Symbols: | ubiquitin family protein | chr2:14889311-14890799 REVERSE LENGTH=225
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11235.1	1	231	231	65.36	231	65	3e-80
Target_name	Start	End	Length	Cov(%)
sp\|F6HTA3_VITVI	1	231	231	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11235.1	1	231	231	56.7	231	57	9e-70
Target_name	Start	End	Length	Cov(%)
AT2G35360.1	1	225	225	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augus-PASA	mRNA	517324	519359	.	-	.	ID=Dca11235.1;Parent=Dca11235
scaffold15	Augus-PASA	exon	517324	517417	.	-	.	ID=Dca11235.1.exon1;Parent=Dca11235.1
scaffold15	Augus-PASA	exon	517506	517570	.	-	.	ID=Dca11235.1.exon2;Parent=Dca11235.1
scaffold15	Augus-PASA	exon	517676	517785	.	-	.	ID=Dca11235.1.exon3;Parent=Dca11235.1
scaffold15	Augus-PASA	exon	517862	517940	.	-	.	ID=Dca11235.1.exon4;Parent=Dca11235.1
scaffold15	Augus-PASA	exon	518046	518137	.	-	.	ID=Dca11235.1.exon5;Parent=Dca11235.1
scaffold15	Augus-PASA	exon	518255	518387	.	-	.	ID=Dca11235.1.exon6;Parent=Dca11235.1
scaffold15	Augus-PASA	exon	519237	519359	.	-	.	ID=Dca11235.1.exon7;Parent=Dca11235.1