Carnation DB

Dca11337.1

Annotation

5-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold1504)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11337.1	65	459	569	30.93	395	45	5e-103
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	452	844	1110	35.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11337.1	63	459	569	23.55	397	34	1e-55
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	360	758	857	46.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1504	Augustus	mRNA	71495	73968	.	+	.	ID=Dca11337.1;Parent=Dca11337
scaffold1504	Augustus	exon	71495	71563	.	+	.	ID=Dca11337.1.exon1;Parent=Dca11337.1
scaffold1504	Augustus	exon	71659	71791	.	+	.	ID=Dca11337.1.exon2;Parent=Dca11337.1
scaffold1504	Augustus	exon	71981	73072	.	+	.	ID=Dca11337.1.exon3;Parent=Dca11337.1
scaffold1504	Augustus	exon	73397	73484	.	+	.	ID=Dca11337.1.exon4;Parent=Dca11337.1
scaffold1504	Augustus	exon	73641	73968	.	+	.	ID=Dca11337.1.exon5;Parent=Dca11337.1