Dca11390.1
Annotation
- 2-exons
- f-1
- sp|B9HI80_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803398#GO:0003677;GO:0008270;GO:0006355#2F1P0C
- sp|B9HXZ3_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_883104#GO:0003677;GO:0008270;GO:0006355#2F1P0C
- Repeat List (scaffold1508)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11390.1 |
80 |
354 |
357 |
38.93 |
275 |
42 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HI80_POPTR |
1 |
324 |
326 |
99.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11390.1 |
100 |
354 |
357 |
33.33 |
255 |
43 |
2e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G62430.1 |
29 |
296 |
298 |
89.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1508 |
Augus-PASA |
mRNA |
68287 |
70127 |
. |
- |
. |
ID=Dca11390.1;Parent=Dca11390 |
| scaffold1508 |
Augus-PASA |
exon |
68287 |
69171 |
. |
- |
. |
ID=Dca11390.1.exon1;Parent=Dca11390.1 |
| scaffold1508 |
Augus-PASA |
exon |
69939 |
70127 |
. |
- |
. |
ID=Dca11390.1.exon2;Parent=Dca11390.1 |
