Carnation DB

Dca11427.1

Annotation

5-exons
f-1
sp|B9S5T3_RICCO#Nuclear transcription factor Y subunit A-3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0654210#GO:0016602;GO:0003677;GO:0003700#2F0P1C
Repeat List (scaffold151)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11427.1	4	322	324	44.13	319	43	2e-50
Target_name	Start	End	Length	Cov(%)
sp\|B9S5T3_RICCO	9	327	335	95.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11427.1	62	316	324	36.41	255	45	3e-37
Target_name	Start	End	Length	Cov(%)
AT1G72830.2	61	319	341	75.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold151	Augus-PASA	mRNA	71180	75386	.	-	.	ID=Dca11427.1;Parent=Dca11427
scaffold151	Augus-PASA	exon	71180	71518	.	-	.	ID=Dca11427.1.exon1;Parent=Dca11427.1
scaffold151	Augus-PASA	exon	72000	72155	.	-	.	ID=Dca11427.1.exon2;Parent=Dca11427.1
scaffold151	Augus-PASA	exon	73328	73393	.	-	.	ID=Dca11427.1.exon3;Parent=Dca11427.1
scaffold151	Augus-PASA	exon	73476	73588	.	-	.	ID=Dca11427.1.exon4;Parent=Dca11427.1
scaffold151	Augustus	exon	75086	75386	.	-	.	ID=Dca11427.1.exon5;Parent=Dca11427.1