Carnation DB

Dca11537.1

Annotation

22-exons
f-1
sp|B9MTW7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_917423#unknown#0F0P0C
Os01t0187400-01 Similar to glycine-rich protein.
Repeat List (scaffold1516)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11537.1	8	1437	1437	67.43	1430	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MTW7_POPTR	1	1440	1442	99.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11537.1	55	1437	1437	62.28	1383	65	0
Target_name	Start	End	Length	Cov(%)
AT5G47020.1	37	1419	1421	97.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1516	Augustus	mRNA	26179	36988	.	+	.	ID=Dca11537.1;Parent=Dca11537
scaffold1516	Augustus	exon	26179	27002	.	+	.	ID=Dca11537.1.exon1;Parent=Dca11537.1
scaffold1516	Augustus	exon	27729	27841	.	+	.	ID=Dca11537.1.exon2;Parent=Dca11537.1
scaffold1516	Augustus	exon	28911	29119	.	+	.	ID=Dca11537.1.exon3;Parent=Dca11537.1
scaffold1516	Augustus	exon	29593	29712	.	+	.	ID=Dca11537.1.exon4;Parent=Dca11537.1
scaffold1516	Augustus	exon	29798	29923	.	+	.	ID=Dca11537.1.exon5;Parent=Dca11537.1
scaffold1516	Augustus	exon	30009	30134	.	+	.	ID=Dca11537.1.exon6;Parent=Dca11537.1
scaffold1516	Augustus	exon	30520	30575	.	+	.	ID=Dca11537.1.exon7;Parent=Dca11537.1
scaffold1516	Augustus	exon	30685	30784	.	+	.	ID=Dca11537.1.exon8;Parent=Dca11537.1
scaffold1516	Augustus	exon	31487	31604	.	+	.	ID=Dca11537.1.exon9;Parent=Dca11537.1
scaffold1516	Augustus	exon	32173	32382	.	+	.	ID=Dca11537.1.exon10;Parent=Dca11537.1
scaffold1516	Augustus	exon	32527	32851	.	+	.	ID=Dca11537.1.exon11;Parent=Dca11537.1
scaffold1516	Augustus	exon	33572	33665	.	+	.	ID=Dca11537.1.exon12;Parent=Dca11537.1
scaffold1516	Augustus	exon	34060	34168	.	+	.	ID=Dca11537.1.exon13;Parent=Dca11537.1
scaffold1516	Augustus	exon	34242	34513	.	+	.	ID=Dca11537.1.exon14;Parent=Dca11537.1
scaffold1516	Augustus	exon	34600	34727	.	+	.	ID=Dca11537.1.exon15;Parent=Dca11537.1
scaffold1516	Augustus	exon	34936	35170	.	+	.	ID=Dca11537.1.exon16;Parent=Dca11537.1
scaffold1516	Augustus	exon	35321	35509	.	+	.	ID=Dca11537.1.exon17;Parent=Dca11537.1
scaffold1516	Augustus	exon	35594	35883	.	+	.	ID=Dca11537.1.exon18;Parent=Dca11537.1
scaffold1516	Augustus	exon	35997	36186	.	+	.	ID=Dca11537.1.exon19;Parent=Dca11537.1
scaffold1516	Augustus	exon	36276	36515	.	+	.	ID=Dca11537.1.exon20;Parent=Dca11537.1
scaffold1516	Augustus	exon	36646	36731	.	+	.	ID=Dca11537.1.exon21;Parent=Dca11537.1
scaffold1516	Augustus	exon	36835	36988	.	+	.	ID=Dca11537.1.exon22;Parent=Dca11537.1