Carnation DB

Dca11540.1

Annotation

7-exons
f-1
sp|D7TTJ6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g00180#GO:0016788#1F0P0C
Os04t0542900-01 Similar to endonuclease, polyU-specific.
Repeat List (scaffold1516)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11540.1	1	411	412	65.53	411	61	7e-154
Target_name	Start	End	Length	Cov(%)
sp\|D7TTJ6_VITVI	1	443	444	99.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11540.1	1	411	412	59.46	411	53	3e-129
Target_name	Start	End	Length	Cov(%)
Os04t0542900-01	58	518	520	88.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1516	Augus-PASA	mRNA	79023	81213	.	+	.	ID=Dca11540.1;Parent=Dca11540
scaffold1516	Augus-PASA	exon	79023	79136	.	+	.	ID=Dca11540.1.exon1;Parent=Dca11540.1
scaffold1516	Augus-PASA	exon	79246	79317	.	+	.	ID=Dca11540.1.exon2;Parent=Dca11540.1
scaffold1516	Augus-PASA	exon	79719	79781	.	+	.	ID=Dca11540.1.exon3;Parent=Dca11540.1
scaffold1516	Augus-PASA	exon	79896	79970	.	+	.	ID=Dca11540.1.exon4;Parent=Dca11540.1
scaffold1516	Augus-PASA	exon	80094	80702	.	+	.	ID=Dca11540.1.exon5;Parent=Dca11540.1
scaffold1516	Augus-PASA	exon	80820	80891	.	+	.	ID=Dca11540.1.exon6;Parent=Dca11540.1
scaffold1516	Augus-PASA	exon	80980	81213	.	+	.	ID=Dca11540.1.exon7;Parent=Dca11540.1