Dca1161.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold1032)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1161.1 |
6 |
524 |
580 |
46.37 |
519 |
49 |
1e-124
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
243 |
765 |
1717 |
30.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1161.1 |
250 |
377 |
580 |
7.58 |
128 |
35 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
67 |
189 |
192 |
64.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1032 |
Augustus |
mRNA |
85378 |
87294 |
. |
- |
. |
ID=Dca1161.1;Parent=Dca1161 |
| scaffold1032 |
Augustus |
exon |
85378 |
85811 |
. |
- |
. |
ID=Dca1161.1.exon1;Parent=Dca1161.1 |
| scaffold1032 |
Augustus |
exon |
85909 |
86463 |
. |
- |
. |
ID=Dca1161.1.exon2;Parent=Dca1161.1 |
| scaffold1032 |
Augustus |
exon |
86541 |
87294 |
. |
- |
. |
ID=Dca1161.1.exon3;Parent=Dca1161.1 |
