Dca11795.1
Annotation
- 2-exons
- f-1
- sp|Q2QSG2_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g24220#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold153)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11795.1 |
2 |
437 |
439 |
68.56 |
436 |
65 |
5e-170
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QSG2_ORYSJ |
1128 |
1595 |
1597 |
29.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11795.1 |
2 |
414 |
439 |
39.86 |
413 |
39 |
5e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
131 |
578 |
1262 |
35.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold153 |
Augustus |
mRNA |
128787 |
130197 |
. |
+ |
. |
ID=Dca11795.1;Parent=Dca11795 |
| scaffold153 |
Augustus |
exon |
128787 |
129363 |
. |
+ |
. |
ID=Dca11795.1.exon1;Parent=Dca11795.1 |
| scaffold153 |
Augustus |
exon |
129455 |
130197 |
. |
+ |
. |
ID=Dca11795.1.exon2;Parent=Dca11795.1 |
