Carnation DB

Dca11858.1

Annotation

7-exons
f-1
sp|B9SKR7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1604350#GO:0005737;GO:0006914#0F1P1C
AT5G17290.1 | Symbols: ATG5, APG5, ATATG5 | autophagy protein Apg5 family | chr5:5687160-5689821 REVERSE LENGTH=337
Repeat List (scaffold1533)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11858.1	16	299	315	49.2	284	54	7e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9SKR7_RICCO	76	360	368	77.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11858.1	16	299	315	44.12	284	49	2e-73
Target_name	Start	End	Length	Cov(%)
AT5G17290.1	78	332	337	75.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1533	Augustus	mRNA	10036	13633	.	-	.	ID=Dca11858.1;Parent=Dca11858
scaffold1533	Augustus	exon	10036	10427	.	-	.	ID=Dca11858.1.exon1;Parent=Dca11858.1
scaffold1533	Augustus	exon	10740	10871	.	-	.	ID=Dca11858.1.exon2;Parent=Dca11858.1
scaffold1533	Augustus	exon	10986	11120	.	-	.	ID=Dca11858.1.exon3;Parent=Dca11858.1
scaffold1533	Augustus	exon	11441	11528	.	-	.	ID=Dca11858.1.exon4;Parent=Dca11858.1
scaffold1533	Augustus	exon	11697	11786	.	-	.	ID=Dca11858.1.exon5;Parent=Dca11858.1
scaffold1533	Augustus	exon	12329	12395	.	-	.	ID=Dca11858.1.exon6;Parent=Dca11858.1
scaffold1533	Augustus	exon	13590	13633	.	-	.	ID=Dca11858.1.exon7;Parent=Dca11858.1