Carnation DB

Dca11877.1

Annotation

5-exons
f-1
sp|B7FJ52_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#unknown#GO:0000166;GO:0017069;GO:0000398#2F1P0C
Os05t0154800-01 Similar to U1snRNP-specific protein, U1A.
Repeat List (scaffold1534)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11877.1	14	243	243	74.07	230	78	5e-100
Target_name	Start	End	Length	Cov(%)
sp\|B7FJ52_MEDTR	13	245	245	95.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11877.1	7	243	243	69.54	237	71	7e-94
Target_name	Start	End	Length	Cov(%)
Os05t0154800-01	15	253	254	94.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1534	Augus-PASA	mRNA	44645	48888	.	-	.	ID=Dca11877.1;Parent=Dca11877
scaffold1534	Augus-PASA	exon	44645	44938	.	-	.	ID=Dca11877.1.exon1;Parent=Dca11877.1
scaffold1534	Augus-PASA	exon	45227	45306	.	-	.	ID=Dca11877.1.exon2;Parent=Dca11877.1
scaffold1534	Augus-PASA	exon	45830	45926	.	-	.	ID=Dca11877.1.exon3;Parent=Dca11877.1
scaffold1534	Augus-PASA	exon	48527	48699	.	-	.	ID=Dca11877.1.exon4;Parent=Dca11877.1
scaffold1534	Augus-PASA	exon	48801	48888	.	-	.	ID=Dca11877.1.exon5;Parent=Dca11877.1