Carnation DB

Dca11972.1

Annotation

8-exons
f-1
sp|B9N7R2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_584875#unknown#0F0P0C
AT1G53490.1 | Symbols: | RING/U-box superfamily protein | chr1:19965146-19966811 FORWARD LENGTH=304
Repeat List (scaffold154)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11972.1	1	299	299	71.57	299	70	2e-122
Target_name	Start	End	Length	Cov(%)
sp\|B9N7R2_POPTR	1	301	301	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11972.1	1	299	299	71.9	299	70	2e-122
Target_name	Start	End	Length	Cov(%)
AT1G53490.1	1	304	304	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold154	Augustus	mRNA	261205	263735	.	-	.	ID=Dca11972.1;Parent=Dca11972
scaffold154	Augustus	exon	261205	261211	.	-	.	ID=Dca11972.1.exon1;Parent=Dca11972.1
scaffold154	Augustus	exon	261306	261576	.	-	.	ID=Dca11972.1.exon2;Parent=Dca11972.1
scaffold154	Augustus	exon	262202	262365	.	-	.	ID=Dca11972.1.exon3;Parent=Dca11972.1
scaffold154	Augustus	exon	262509	262746	.	-	.	ID=Dca11972.1.exon4;Parent=Dca11972.1
scaffold154	Augustus	exon	262878	262908	.	-	.	ID=Dca11972.1.exon5;Parent=Dca11972.1
scaffold154	Augustus	exon	263049	263094	.	-	.	ID=Dca11972.1.exon6;Parent=Dca11972.1
scaffold154	Augustus	exon	263431	263503	.	-	.	ID=Dca11972.1.exon7;Parent=Dca11972.1
scaffold154	Augustus	exon	263666	263735	.	-	.	ID=Dca11972.1.exon8;Parent=Dca11972.1