Dca11987.1
Annotation
- 3-exons
- f-3
- sp|A5BJD2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_020846#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15405)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11987.1 |
38 |
493 |
525 |
60.19 |
456 |
70 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BJD2_VITVI |
846 |
1301 |
1791 |
25.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11987.1 |
81 |
492 |
525 |
25.71 |
412 |
33 |
6e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
10 |
398 |
591 |
65.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15405 |
Augustus |
mRNA |
481 |
8931 |
. |
+ |
. |
ID=Dca11987.1;Parent=Dca11987 |
| scaffold15405 |
Augustus |
exon |
481 |
589 |
. |
+ |
. |
ID=Dca11987.1.exon1;Parent=Dca11987.1 |
| scaffold15405 |
Augustus |
exon |
4955 |
6325 |
. |
+ |
. |
ID=Dca11987.1.exon2;Parent=Dca11987.1 |
| scaffold15405 |
Augustus |
exon |
8832 |
8931 |
. |
+ |
. |
ID=Dca11987.1.exon3;Parent=Dca11987.1 |
