Carnation DB

Dca12006.1

Annotation

7-exons
f-1
sp|B9H7C4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818514#unknown#0F0P0C
Repeat List (scaffold1542)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12006.1	2	390	400	47.25	389	44	4e-90
Target_name	Start	End	Length	Cov(%)
sp\|B9H7C4_POPTR	3	408	409	99.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12006.1	227	381	400	15.5	155	40	7e-23
Target_name	Start	End	Length	Cov(%)
Os04t0450500-01	114	248	252	53.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1542	Augustus	mRNA	79214	81326	.	-	.	ID=Dca12006.1;Parent=Dca12006
scaffold1542	Augustus	exon	79214	79681	.	-	.	ID=Dca12006.1.exon1;Parent=Dca12006.1
scaffold1542	Augustus	exon	79762	79855	.	-	.	ID=Dca12006.1.exon2;Parent=Dca12006.1
scaffold1542	Augustus	exon	80043	80209	.	-	.	ID=Dca12006.1.exon3;Parent=Dca12006.1
scaffold1542	Augustus	exon	80414	80535	.	-	.	ID=Dca12006.1.exon4;Parent=Dca12006.1
scaffold1542	Augustus	exon	80631	80732	.	-	.	ID=Dca12006.1.exon5;Parent=Dca12006.1
scaffold1542	Augustus	exon	80945	81083	.	-	.	ID=Dca12006.1.exon6;Parent=Dca12006.1
scaffold1542	Augustus	exon	81216	81326	.	-	.	ID=Dca12006.1.exon7;Parent=Dca12006.1