Dca12020.1
Annotation
- 4-exons
- f-1
- sp|D7LLR4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_322489#GO:0005524;GO:0016301;GO:0017111;GO:0016773#4F0P0C
- AT2G01460.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:206136-211765 FORWARD LENGTH=955
- Repeat List (scaffold1543)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12020.1 |
1 |
139 |
140 |
72.14 |
139 |
73 |
2e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LLR4_ARALL |
805 |
944 |
945 |
14.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12020.1 |
6 |
139 |
140 |
67.14 |
134 |
70 |
6e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G01460.1 |
820 |
954 |
955 |
14.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1543 |
Augustus |
mRNA |
62879 |
64299 |
. |
- |
. |
ID=Dca12020.1;Parent=Dca12020 |
| scaffold1543 |
Augustus |
exon |
62879 |
62944 |
. |
- |
. |
ID=Dca12020.1.exon1;Parent=Dca12020.1 |
| scaffold1543 |
Augustus |
exon |
63033 |
63149 |
. |
- |
. |
ID=Dca12020.1.exon2;Parent=Dca12020.1 |
| scaffold1543 |
Augustus |
exon |
63965 |
64078 |
. |
- |
. |
ID=Dca12020.1.exon3;Parent=Dca12020.1 |
| scaffold1543 |
Augustus |
exon |
64174 |
64299 |
. |
- |
. |
ID=Dca12020.1.exon4;Parent=Dca12020.1 |
