Carnation DB

Dca12024.1

Annotation

7-exons
f-1
sp|E0CPU6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g10420#unknown#0F0P0C
sp|B9R7B1_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1590210#unknown#0F0P0C
Repeat List (scaffold1544)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12024.1	36	568	568	53.87	533	55	3e-142
Target_name	Start	End	Length	Cov(%)
sp\|E0CPU6_VITVI	48	570	570	91.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12024.1	19	568	568	44.89	550	43	3e-92
Target_name	Start	End	Length	Cov(%)
AT1G45207.2	23	555	555	96.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1544	Augustus	mRNA	14189	17421	.	-	.	ID=Dca12024.1;Parent=Dca12024
scaffold1544	Augustus	exon	14189	14395	.	-	.	ID=Dca12024.1.exon1;Parent=Dca12024.1
scaffold1544	Augustus	exon	14698	14779	.	-	.	ID=Dca12024.1.exon2;Parent=Dca12024.1
scaffold1544	Augustus	exon	14893	15256	.	-	.	ID=Dca12024.1.exon3;Parent=Dca12024.1
scaffold1544	Augustus	exon	15852	16484	.	-	.	ID=Dca12024.1.exon4;Parent=Dca12024.1
scaffold1544	Augustus	exon	16737	16829	.	-	.	ID=Dca12024.1.exon5;Parent=Dca12024.1
scaffold1544	Augustus	exon	16935	17103	.	-	.	ID=Dca12024.1.exon6;Parent=Dca12024.1
scaffold1544	Augustus	exon	17263	17421	.	-	.	ID=Dca12024.1.exon7;Parent=Dca12024.1