Carnation DB

Dca12117.1

Annotation

38-exons
f-1
sp|B9HDW1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561027#GO:0016459;GO:0003779;GO:0005524;GO:0003774#3F0P1C
Os06t0488200-01 Similar to Myosin heavy chain (Fragment).
Repeat List (scaffold155)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12117.1	1	1559	1561	75.46	1559	76	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HDW1_POPTR	11	1538	1539	99.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12117.1	5	1556	1561	72.96	1552	74	0
Target_name	Start	End	Length	Cov(%)
AT5G20490.1	20	1537	1545	98.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold155	Augustus	mRNA	190563	198993	.	-	.	ID=Dca12117.1;Parent=Dca12117
scaffold155	Augustus	exon	190563	190689	.	-	.	ID=Dca12117.1.exon1;Parent=Dca12117.1
scaffold155	Augustus	exon	190792	190871	.	-	.	ID=Dca12117.1.exon2;Parent=Dca12117.1
scaffold155	Augustus	exon	190990	191070	.	-	.	ID=Dca12117.1.exon3;Parent=Dca12117.1
scaffold155	Augustus	exon	191169	191225	.	-	.	ID=Dca12117.1.exon4;Parent=Dca12117.1
scaffold155	Augustus	exon	191329	191385	.	-	.	ID=Dca12117.1.exon5;Parent=Dca12117.1
scaffold155	Augustus	exon	191475	191574	.	-	.	ID=Dca12117.1.exon6;Parent=Dca12117.1
scaffold155	Augustus	exon	191697	191767	.	-	.	ID=Dca12117.1.exon7;Parent=Dca12117.1
scaffold155	Augustus	exon	191846	191983	.	-	.	ID=Dca12117.1.exon8;Parent=Dca12117.1
scaffold155	Augustus	exon	192085	192285	.	-	.	ID=Dca12117.1.exon9;Parent=Dca12117.1
scaffold155	Augustus	exon	192379	192534	.	-	.	ID=Dca12117.1.exon10;Parent=Dca12117.1
scaffold155	Augustus	exon	192641	192811	.	-	.	ID=Dca12117.1.exon11;Parent=Dca12117.1
scaffold155	Augustus	exon	192933	193001	.	-	.	ID=Dca12117.1.exon12;Parent=Dca12117.1
scaffold155	Augustus	exon	193083	193142	.	-	.	ID=Dca12117.1.exon13;Parent=Dca12117.1
scaffold155	Augustus	exon	193244	193466	.	-	.	ID=Dca12117.1.exon14;Parent=Dca12117.1
scaffold155	Augustus	exon	193583	193722	.	-	.	ID=Dca12117.1.exon15;Parent=Dca12117.1
scaffold155	Augustus	exon	193856	194077	.	-	.	ID=Dca12117.1.exon16;Parent=Dca12117.1
scaffold155	Augustus	exon	194166	194264	.	-	.	ID=Dca12117.1.exon17;Parent=Dca12117.1
scaffold155	Augustus	exon	194359	194478	.	-	.	ID=Dca12117.1.exon18;Parent=Dca12117.1
scaffold155	Augustus	exon	194573	194778	.	-	.	ID=Dca12117.1.exon19;Parent=Dca12117.1
scaffold155	Augustus	exon	194897	195074	.	-	.	ID=Dca12117.1.exon20;Parent=Dca12117.1
scaffold155	Augustus	exon	195182	195242	.	-	.	ID=Dca12117.1.exon21;Parent=Dca12117.1
scaffold155	Augustus	exon	195360	195469	.	-	.	ID=Dca12117.1.exon22;Parent=Dca12117.1
scaffold155	Augustus	exon	195560	195691	.	-	.	ID=Dca12117.1.exon23;Parent=Dca12117.1
scaffold155	Augustus	exon	195859	196029	.	-	.	ID=Dca12117.1.exon24;Parent=Dca12117.1
scaffold155	Augustus	exon	196109	196235	.	-	.	ID=Dca12117.1.exon25;Parent=Dca12117.1
scaffold155	Augustus	exon	196328	196365	.	-	.	ID=Dca12117.1.exon26;Parent=Dca12117.1
scaffold155	Augustus	exon	196448	196549	.	-	.	ID=Dca12117.1.exon27;Parent=Dca12117.1
scaffold155	Augustus	exon	196647	196704	.	-	.	ID=Dca12117.1.exon28;Parent=Dca12117.1
scaffold155	Augustus	exon	196786	196887	.	-	.	ID=Dca12117.1.exon29;Parent=Dca12117.1
scaffold155	Augustus	exon	196970	197116	.	-	.	ID=Dca12117.1.exon30;Parent=Dca12117.1
scaffold155	Augustus	exon	197199	197335	.	-	.	ID=Dca12117.1.exon31;Parent=Dca12117.1
scaffold155	Augustus	exon	197415	197564	.	-	.	ID=Dca12117.1.exon32;Parent=Dca12117.1
scaffold155	Augustus	exon	197745	197904	.	-	.	ID=Dca12117.1.exon33;Parent=Dca12117.1
scaffold155	Augustus	exon	198000	198058	.	-	.	ID=Dca12117.1.exon34;Parent=Dca12117.1
scaffold155	Augustus	exon	198155	198311	.	-	.	ID=Dca12117.1.exon35;Parent=Dca12117.1
scaffold155	Augustus	exon	198403	198548	.	-	.	ID=Dca12117.1.exon36;Parent=Dca12117.1
scaffold155	Augustus	exon	198628	198771	.	-	.	ID=Dca12117.1.exon37;Parent=Dca12117.1
scaffold155	Augustus	exon	198865	198993	.	-	.	ID=Dca12117.1.exon38;Parent=Dca12117.1
scaffold155	Augustus	mRNA	190563	193297	.	-	.	ID=Dca12117.2;Parent=Dca12117
scaffold155	Augustus	exon	190563	190689	.	-	.	ID=Dca12117.2.exon1;Parent=Dca12117.2
scaffold155	Augustus	exon	190792	190871	.	-	.	ID=Dca12117.2.exon2;Parent=Dca12117.2
scaffold155	Augustus	exon	190990	191070	.	-	.	ID=Dca12117.2.exon3;Parent=Dca12117.2
scaffold155	Augustus	exon	191169	191225	.	-	.	ID=Dca12117.2.exon4;Parent=Dca12117.2
scaffold155	Augustus	exon	191329	191385	.	-	.	ID=Dca12117.2.exon5;Parent=Dca12117.2
scaffold155	Augustus	exon	191475	191574	.	-	.	ID=Dca12117.2.exon6;Parent=Dca12117.2
scaffold155	Augustus	exon	191697	191767	.	-	.	ID=Dca12117.2.exon7;Parent=Dca12117.2
scaffold155	Augustus	exon	191846	191983	.	-	.	ID=Dca12117.2.exon8;Parent=Dca12117.2
scaffold155	Augustus	exon	192085	192285	.	-	.	ID=Dca12117.2.exon9;Parent=Dca12117.2
scaffold155	Augustus	exon	192379	192534	.	-	.	ID=Dca12117.2.exon10;Parent=Dca12117.2
scaffold155	Augustus	exon	192641	192811	.	-	.	ID=Dca12117.2.exon11;Parent=Dca12117.2
scaffold155	Augustus	exon	192933	193001	.	-	.	ID=Dca12117.2.exon12;Parent=Dca12117.2
scaffold155	Augustus	exon	193083	193142	.	-	.	ID=Dca12117.2.exon13;Parent=Dca12117.2
scaffold155	Augustus	exon	193244	193297	.	-	.	ID=Dca12117.2.exon14;Parent=Dca12117.2