Carnation DB

Dca12238.1

Annotation

7-exons
f-1
sp|B9SHH8_RICCO#Endonuclease, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1121850#GO:0004519;GO:0003676#2F0P0C
Repeat List (scaffold1558)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12238.1	1	281	282	63.12	281	63	4e-93
Target_name	Start	End	Length	Cov(%)
sp\|B9SHH8_RICCO	1	268	275	97.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12238.1	100	281	282	50	182	78	1e-84
Target_name	Start	End	Length	Cov(%)
AT2G23840.1	96	277	284	64.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1558	Augus-PASA	mRNA	23440	28009	.	+	.	ID=Dca12238.1;Parent=Dca12238
scaffold1558	Augus-PASA	exon	23440	23792	.	+	.	ID=Dca12238.1.exon1;Parent=Dca12238.1
scaffold1558	Augus-PASA	exon	24690	24744	.	+	.	ID=Dca12238.1.exon2;Parent=Dca12238.1
scaffold1558	Augus-PASA	exon	25384	25458	.	+	.	ID=Dca12238.1.exon3;Parent=Dca12238.1
scaffold1558	Augus-PASA	exon	26841	26932	.	+	.	ID=Dca12238.1.exon4;Parent=Dca12238.1
scaffold1558	Augus-PASA	exon	27068	27149	.	+	.	ID=Dca12238.1.exon5;Parent=Dca12238.1
scaffold1558	Augus-PASA	exon	27609	27692	.	+	.	ID=Dca12238.1.exon6;Parent=Dca12238.1
scaffold1558	Augus-PASA	exon	27902	28009	.	+	.	ID=Dca12238.1.exon7;Parent=Dca12238.1