Dca12250.1
Annotation
- 3-exons
- f-1
- sp|F6HKT0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02110#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- Os01t0152000-01 Protein kinase, core domain containing protein.
- Repeat List (scaffold1559)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12250.1 |
60 |
464 |
1013 |
16.78 |
405 |
39 |
5e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HKT0_VITVI |
1068 |
1498 |
1777 |
24.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12250.1 |
61 |
999 |
1013 |
42.25 |
939 |
44 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0152000-01 |
54 |
1038 |
1066 |
92.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1559 |
Augustus |
mRNA |
12544 |
16020 |
. |
+ |
. |
ID=Dca12250.1;Parent=Dca12250 |
| scaffold1559 |
Augustus |
exon |
12544 |
15229 |
. |
+ |
. |
ID=Dca12250.1.exon1;Parent=Dca12250.1 |
| scaffold1559 |
Augustus |
exon |
15578 |
15925 |
. |
+ |
. |
ID=Dca12250.1.exon2;Parent=Dca12250.1 |
| scaffold1559 |
Augustus |
exon |
16013 |
16020 |
. |
+ |
. |
ID=Dca12250.1.exon3;Parent=Dca12250.1 |
