Carnation DB

Dca12272.1

Annotation

7-exons
f-1
sp|G7J0R5_MEDTR#HIV Tat-specific factor-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g031740#GO:0005622;GO:0003676;GO:0000166;GO:0008270#3F0P1C
Repeat List (scaffold156)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12272.1	77	431	431	45.93	355	53	3e-72
Target_name	Start	End	Length	Cov(%)
sp\|G7J0R5_MEDTR	128	473	473	73.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12272.1	78	431	431	42.92	354	51	5e-53
Target_name	Start	End	Length	Cov(%)
AT5G58470.1	88	422	422	79.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold156	Augus-PASA	mRNA	42007	47120	.	+	.	ID=Dca12272.1;Parent=Dca12272
scaffold156	Augus-PASA	exon	42007	42139	.	+	.	ID=Dca12272.1.exon1;Parent=Dca12272.1
scaffold156	Augus-PASA	exon	42263	42380	.	+	.	ID=Dca12272.1.exon2;Parent=Dca12272.1
scaffold156	Augustus	exon	42494	43133	.	+	.	ID=Dca12272.1.exon3;Parent=Dca12272.1
scaffold156	Augustus	exon	46153	46303	.	+	.	ID=Dca12272.1.exon4;Parent=Dca12272.1
scaffold156	Augustus	exon	46389	46467	.	+	.	ID=Dca12272.1.exon5;Parent=Dca12272.1
scaffold156	Augustus	exon	46581	46637	.	+	.	ID=Dca12272.1.exon6;Parent=Dca12272.1
scaffold156	Augustus	exon	47003	47120	.	+	.	ID=Dca12272.1.exon7;Parent=Dca12272.1