Carnation DB

Dca12276.1

Annotation

5-exons
f-1
sp|F6GUI4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g07430#GO:0035091;GO:0007154#1F1P0C
AT5G58440.1 | Symbols: SNX2a | sorting nexin 2A | chr5:23624154-23626676 REVERSE LENGTH=587
Repeat List (scaffold156)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12276.1	39	526	528	64.01	488	66	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GUI4_VITVI	43	554	556	92.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12276.1	31	526	528	63.06	496	63	0
Target_name	Start	End	Length	Cov(%)
AT5G58440.1	58	583	587	89.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold156	Augus-PASA	mRNA	71522	75395	.	-	.	ID=Dca12276.1;Parent=Dca12276
scaffold156	Augus-PASA	exon	71522	71602	.	-	.	ID=Dca12276.1.exon1;Parent=Dca12276.1
scaffold156	Augus-PASA	exon	72180	72266	.	-	.	ID=Dca12276.1.exon2;Parent=Dca12276.1
scaffold156	Augus-PASA	exon	73599	73856	.	-	.	ID=Dca12276.1.exon3;Parent=Dca12276.1
scaffold156	Augus-PASA	exon	74059	74268	.	-	.	ID=Dca12276.1.exon4;Parent=Dca12276.1
scaffold156	Augus-PASA	exon	74445	75395	.	-	.	ID=Dca12276.1.exon5;Parent=Dca12276.1