Carnation DB

Dca12307.1

Annotation

59-exons
f-1
sp|B9RJG2_RICCO#Homomeric Acetyl-CoA Carboxylase (Hom-ACCase)#Ricinus communis (Castor bean)#ORFNames=RCOM_1033990#GO:0003989;GO:0005524;GO:0004075;GO:0046872;GO:0006633#4F1P0C
Repeat List (scaffold1560)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12307.1	2325	4462	4490	35.21	2138	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RJG2_RICCO	5	2242	2259	99.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12307.1	2325	4462	4490	34.54	2138	70	0
Target_name	Start	End	Length	Cov(%)
AT1G36160.1	5	2237	2254	99.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1560	Augustus	mRNA	17800	47474	.	+	.	ID=Dca12307.1;Parent=Dca12307
scaffold1560	Augustus	exon	17800	18147	.	+	.	ID=Dca12307.1.exon1;Parent=Dca12307.1
scaffold1560	Augustus	exon	18322	18528	.	+	.	ID=Dca12307.1.exon2;Parent=Dca12307.1
scaffold1560	Augustus	exon	18616	18777	.	+	.	ID=Dca12307.1.exon3;Parent=Dca12307.1
scaffold1560	Augustus	exon	18987	19079	.	+	.	ID=Dca12307.1.exon4;Parent=Dca12307.1
scaffold1560	Augustus	exon	19164	19259	.	+	.	ID=Dca12307.1.exon5;Parent=Dca12307.1
scaffold1560	Augustus	exon	19518	19691	.	+	.	ID=Dca12307.1.exon6;Parent=Dca12307.1
scaffold1560	Augustus	exon	19975	20068	.	+	.	ID=Dca12307.1.exon7;Parent=Dca12307.1
scaffold1560	Augustus	exon	20160	20347	.	+	.	ID=Dca12307.1.exon8;Parent=Dca12307.1
scaffold1560	Augustus	exon	20430	20480	.	+	.	ID=Dca12307.1.exon9;Parent=Dca12307.1
scaffold1560	Augustus	exon	20605	20644	.	+	.	ID=Dca12307.1.exon10;Parent=Dca12307.1
scaffold1560	Augustus	exon	21052	21176	.	+	.	ID=Dca12307.1.exon11;Parent=Dca12307.1
scaffold1560	Augustus	exon	21283	21588	.	+	.	ID=Dca12307.1.exon12;Parent=Dca12307.1
scaffold1560	Augustus	exon	21670	21726	.	+	.	ID=Dca12307.1.exon13;Parent=Dca12307.1
scaffold1560	Augustus	exon	21831	21935	.	+	.	ID=Dca12307.1.exon14;Parent=Dca12307.1
scaffold1560	Augustus	exon	22396	22482	.	+	.	ID=Dca12307.1.exon15;Parent=Dca12307.1
scaffold1560	Augustus	exon	22572	22763	.	+	.	ID=Dca12307.1.exon16;Parent=Dca12307.1
scaffold1560	Augustus	exon	23051	23239	.	+	.	ID=Dca12307.1.exon17;Parent=Dca12307.1
scaffold1560	Augustus	exon	23527	23637	.	+	.	ID=Dca12307.1.exon18;Parent=Dca12307.1
scaffold1560	Augustus	exon	23741	23827	.	+	.	ID=Dca12307.1.exon19;Parent=Dca12307.1
scaffold1560	Augustus	exon	23912	24088	.	+	.	ID=Dca12307.1.exon20;Parent=Dca12307.1
scaffold1560	Augustus	exon	24296	24373	.	+	.	ID=Dca12307.1.exon21;Parent=Dca12307.1
scaffold1560	Augustus	exon	24460	24582	.	+	.	ID=Dca12307.1.exon22;Parent=Dca12307.1
scaffold1560	Augustus	exon	25009	25278	.	+	.	ID=Dca12307.1.exon23;Parent=Dca12307.1
scaffold1560	Augustus	exon	25374	25714	.	+	.	ID=Dca12307.1.exon24;Parent=Dca12307.1
scaffold1560	Augustus	exon	25883	26120	.	+	.	ID=Dca12307.1.exon25;Parent=Dca12307.1
scaffold1560	Augustus	exon	26253	26593	.	+	.	ID=Dca12307.1.exon26;Parent=Dca12307.1
scaffold1560	Augus-PASA	exon	26691	26904	.	+	.	ID=Dca12307.1.exon27;Parent=Dca12307.1
scaffold1560	Augus-PASA	exon	27215	27391	.	+	.	ID=Dca12307.1.exon28;Parent=Dca12307.1
scaffold1560	Augustus	exon	27535	29688	.	+	.	ID=Dca12307.1.exon29;Parent=Dca12307.1
scaffold1560	Augustus	exon	29826	29877	.	+	.	ID=Dca12307.1.exon30;Parent=Dca12307.1
scaffold1560	Augustus	exon	35176	35609	.	+	.	ID=Dca12307.1.exon31;Parent=Dca12307.1
scaffold1560	Augustus	exon	36171	36377	.	+	.	ID=Dca12307.1.exon32;Parent=Dca12307.1
scaffold1560	Augustus	exon	36470	36631	.	+	.	ID=Dca12307.1.exon33;Parent=Dca12307.1
scaffold1560	Augustus	exon	36739	36831	.	+	.	ID=Dca12307.1.exon34;Parent=Dca12307.1
scaffold1560	Augustus	exon	36922	37017	.	+	.	ID=Dca12307.1.exon35;Parent=Dca12307.1
scaffold1560	Augustus	exon	37131	37304	.	+	.	ID=Dca12307.1.exon36;Parent=Dca12307.1
scaffold1560	Augustus	exon	37581	37674	.	+	.	ID=Dca12307.1.exon37;Parent=Dca12307.1
scaffold1560	Augustus	exon	37764	37951	.	+	.	ID=Dca12307.1.exon38;Parent=Dca12307.1
scaffold1560	Augustus	exon	38045	38095	.	+	.	ID=Dca12307.1.exon39;Parent=Dca12307.1
scaffold1560	Augustus	exon	38736	38852	.	+	.	ID=Dca12307.1.exon40;Parent=Dca12307.1
scaffold1560	Augustus	exon	38951	39025	.	+	.	ID=Dca12307.1.exon41;Parent=Dca12307.1
scaffold1560	Augustus	exon	39116	39172	.	+	.	ID=Dca12307.1.exon42;Parent=Dca12307.1
scaffold1560	Augustus	exon	39288	39392	.	+	.	ID=Dca12307.1.exon43;Parent=Dca12307.1
scaffold1560	Augustus	exon	39820	39906	.	+	.	ID=Dca12307.1.exon44;Parent=Dca12307.1
scaffold1560	Augustus	exon	39990	40181	.	+	.	ID=Dca12307.1.exon45;Parent=Dca12307.1
scaffold1560	Augustus	exon	40268	40456	.	+	.	ID=Dca12307.1.exon46;Parent=Dca12307.1
scaffold1560	Augustus	exon	40982	41092	.	+	.	ID=Dca12307.1.exon47;Parent=Dca12307.1
scaffold1560	Augustus	exon	41220	41306	.	+	.	ID=Dca12307.1.exon48;Parent=Dca12307.1
scaffold1560	Augustus	exon	41446	41622	.	+	.	ID=Dca12307.1.exon49;Parent=Dca12307.1
scaffold1560	Augustus	exon	41967	42044	.	+	.	ID=Dca12307.1.exon50;Parent=Dca12307.1
scaffold1560	Augustus	exon	42176	42298	.	+	.	ID=Dca12307.1.exon51;Parent=Dca12307.1
scaffold1560	Augustus	exon	42513	42782	.	+	.	ID=Dca12307.1.exon52;Parent=Dca12307.1
scaffold1560	Augustus	exon	42868	43151	.	+	.	ID=Dca12307.1.exon53;Parent=Dca12307.1
scaffold1560	Augustus	exon	43258	43495	.	+	.	ID=Dca12307.1.exon54;Parent=Dca12307.1
scaffold1560	Augustus	exon	43946	44286	.	+	.	ID=Dca12307.1.exon55;Parent=Dca12307.1
scaffold1560	Augustus	exon	44409	44622	.	+	.	ID=Dca12307.1.exon56;Parent=Dca12307.1
scaffold1560	Augustus	exon	44847	44967	.	+	.	ID=Dca12307.1.exon57;Parent=Dca12307.1
scaffold1560	Augustus	exon	45121	47284	.	+	.	ID=Dca12307.1.exon58;Parent=Dca12307.1
scaffold1560	Augustus	exon	47408	47474	.	+	.	ID=Dca12307.1.exon59;Parent=Dca12307.1