Dca12316.1
Annotation
- 3-exons
- f-1
- sp|F6H023_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g11580#GO:0009055;GO:0020037;GO:0004497;GO:0016705#4F0P0C
- sp|B9MVH5_POPTR#Cytochrome P450#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CYP82C11v1#GO:0009055;GO:0020037;GO:0004497;GO:0016705#4F0P0C
- Repeat List (scaffold1560)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12316.1 |
140 |
284 |
290 |
25.86 |
145 |
39 |
5e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H023_VITVI |
79 |
272 |
521 |
37.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12316.1 |
140 |
287 |
290 |
24.13 |
148 |
34 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G31940.1 |
75 |
278 |
524 |
38.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1560 |
Augustus |
mRNA |
78172 |
80825 |
. |
- |
. |
ID=Dca12316.1;Parent=Dca12316 |
| scaffold1560 |
Augustus |
exon |
78172 |
78329 |
. |
- |
. |
ID=Dca12316.1.exon1;Parent=Dca12316.1 |
| scaffold1560 |
Augustus |
exon |
78784 |
79080 |
. |
- |
. |
ID=Dca12316.1.exon2;Parent=Dca12316.1 |
| scaffold1560 |
Augustus |
exon |
80408 |
80825 |
. |
- |
. |
ID=Dca12316.1.exon3;Parent=Dca12316.1 |
