Dca12336.1
Annotation
- 4-exons
- f-1
- sp|E1U343_9ROSI#Sequence-specific DNA binding/transcription factor#Jatropha curcas#unknown#GO:0005634;GO:0043565;GO:0003700#2F0P1C
- Repeat List (scaffold15616)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12336.1 |
25 |
108 |
116 |
40.51 |
84 |
56 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E1U343_9ROSI |
18 |
101 |
234 |
35.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12336.1 |
3 |
110 |
116 |
45.68 |
108 |
50 |
5e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G18380.2 |
6 |
92 |
349 |
24.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15616 |
Augustus |
mRNA |
832 |
1915 |
. |
- |
. |
ID=Dca12336.1;Parent=Dca12336 |
| scaffold15616 |
Augustus |
exon |
832 |
973 |
. |
- |
. |
ID=Dca12336.1.exon1;Parent=Dca12336.1 |
| scaffold15616 |
Augustus |
exon |
1056 |
1101 |
. |
- |
. |
ID=Dca12336.1.exon2;Parent=Dca12336.1 |
| scaffold15616 |
Augustus |
exon |
1200 |
1285 |
. |
- |
. |
ID=Dca12336.1.exon3;Parent=Dca12336.1 |
| scaffold15616 |
Augustus |
exon |
1841 |
1915 |
. |
- |
. |
ID=Dca12336.1.exon4;Parent=Dca12336.1 |
