Carnation DB

Dca12497.1

Annotation

5-exons
f-1
sp|B9I7U3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_893320#GO:0003723#1F0P0C
AT5G54890.1 | Symbols: | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | chr5:22293346-22294909 FORWARD LENGTH=358
Repeat List (scaffold1572)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12497.1	23	354	360	65.55	332	71	2e-132
Target_name	Start	End	Length	Cov(%)
sp\|B9I7U3_POPTR	27	354	354	92.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12497.1	65	345	360	55.83	281	72	6e-123
Target_name	Start	End	Length	Cov(%)
AT5G54890.1	77	349	358	76.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1572	Augustus	mRNA	54777	57977	.	+	.	ID=Dca12497.1;Parent=Dca12497
scaffold1572	Augustus	exon	54777	55245	.	+	.	ID=Dca12497.1.exon1;Parent=Dca12497.1
scaffold1572	Augustus	exon	57010	57155	.	+	.	ID=Dca12497.1.exon2;Parent=Dca12497.1
scaffold1572	Augustus	exon	57262	57487	.	+	.	ID=Dca12497.1.exon3;Parent=Dca12497.1
scaffold1572	Augustus	exon	57589	57716	.	+	.	ID=Dca12497.1.exon4;Parent=Dca12497.1
scaffold1572	Augustus	exon	57864	57977	.	+	.	ID=Dca12497.1.exon5;Parent=Dca12497.1