Carnation DB

Dca12498.1

Annotation

7-exons
f-1
sp|F6HEJ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g00280#GO:0003676;GO:0000166#2F0P0C
Os03t0569900-01 Similar to RNA Binding Protein 45.
Repeat List (scaffold1572)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12498.1	81	411	437	55.83	331	73	5e-134
Target_name	Start	End	Length	Cov(%)
sp\|F6HEJ3_VITVI	83	417	463	72.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12498.1	34	406	437	52.86	373	60	3e-124
Target_name	Start	End	Length	Cov(%)
Os03t0569900-01	10	391	403	94.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1572	Augus-PASA	mRNA	68575	74760	.	+	.	ID=Dca12498.1;Parent=Dca12498
scaffold1572	Augus-PASA	exon	68575	68913	.	+	.	ID=Dca12498.1.exon1;Parent=Dca12498.1
scaffold1572	Augus-PASA	exon	70130	70598	.	+	.	ID=Dca12498.1.exon2;Parent=Dca12498.1
scaffold1572	Augus-PASA	exon	72484	72536	.	+	.	ID=Dca12498.1.exon3;Parent=Dca12498.1
scaffold1572	Augus-PASA	exon	72825	72955	.	+	.	ID=Dca12498.1.exon4;Parent=Dca12498.1
scaffold1572	Augus-PASA	exon	73050	73146	.	+	.	ID=Dca12498.1.exon5;Parent=Dca12498.1
scaffold1572	Augus-PASA	exon	73241	73384	.	+	.	ID=Dca12498.1.exon6;Parent=Dca12498.1
scaffold1572	Augustus	exon	74680	74760	.	+	.	ID=Dca12498.1.exon7;Parent=Dca12498.1