Dca12505.1
Annotation
- 3-exons
- f-1
- sp|A5ATG4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032431#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold15728)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12505.1 |
1 |
517 |
535 |
59.43 |
517 |
56 |
1e-179
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ATG4_VITVI |
476 |
1047 |
1292 |
44.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12505.1 |
1 |
509 |
535 |
32.52 |
509 |
31 |
1e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
662 |
1234 |
1539 |
37.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15728 |
Augustus |
mRNA |
2279 |
4152 |
. |
+ |
. |
ID=Dca12505.1;Parent=Dca12505 |
| scaffold15728 |
Augustus |
exon |
2279 |
2979 |
. |
+ |
. |
ID=Dca12505.1.exon1;Parent=Dca12505.1 |
| scaffold15728 |
Augustus |
exon |
3054 |
3476 |
. |
+ |
. |
ID=Dca12505.1.exon2;Parent=Dca12505.1 |
| scaffold15728 |
Augustus |
exon |
3669 |
4152 |
. |
+ |
. |
ID=Dca12505.1.exon3;Parent=Dca12505.1 |
