Carnation DB

Dca12548.1

Annotation

5-exons
f-1
sp|A5BTQ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_007696#GO:0008270#1F0P0C
Os06t0704400-02 Transposase, MuDR, plant domain containing protein.
Repeat List (scaffold1576)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12548.1	249	598	742	21.15	350	45	5e-86
Target_name	Start	End	Length	Cov(%)
sp\|A5BTQ2_VITVI	253	589	632	53.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12548.1	266	653	742	19.27	388	37	3e-70
Target_name	Start	End	Length	Cov(%)
Os06t0704400-02	263	649	805	48.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1576	Augustus	mRNA	40891	47273	.	+	.	ID=Dca12548.1;Parent=Dca12548
scaffold1576	Augustus	exon	40891	41680	.	+	.	ID=Dca12548.1.exon1;Parent=Dca12548.1
scaffold1576	Augustus	exon	42059	42441	.	+	.	ID=Dca12548.1.exon2;Parent=Dca12548.1
scaffold1576	Augustus	exon	42546	42689	.	+	.	ID=Dca12548.1.exon3;Parent=Dca12548.1
scaffold1576	Augustus	exon	42783	43458	.	+	.	ID=Dca12548.1.exon4;Parent=Dca12548.1
scaffold1576	Augustus	exon	47038	47273	.	+	.	ID=Dca12548.1.exon5;Parent=Dca12548.1