Dca12574.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1578)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12574.1 |
11 |
493 |
499 |
39.67 |
483 |
36 |
6e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
106 |
643 |
1313 |
40.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12574.1 |
373 |
496 |
499 |
8.41 |
124 |
34 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
616 |
1428 |
8.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1578 |
Augustus |
mRNA |
14551 |
16387 |
. |
+ |
. |
ID=Dca12574.1;Parent=Dca12574 |
| scaffold1578 |
Augustus |
exon |
14551 |
15399 |
. |
+ |
. |
ID=Dca12574.1.exon1;Parent=Dca12574.1 |
| scaffold1578 |
Augustus |
exon |
15504 |
15687 |
. |
+ |
. |
ID=Dca12574.1.exon2;Parent=Dca12574.1 |
| scaffold1578 |
Augustus |
exon |
15921 |
16387 |
. |
+ |
. |
ID=Dca12574.1.exon3;Parent=Dca12574.1 |
