Carnation DB

Dca12603.1

Annotation

7-exons
f-1
sp|B9MYF1_POPTR#Aminotransferase family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=AMT2#GO:0016847;GO:0030170#2F0P0C
Repeat List (scaffold158)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12603.1	3	422	427	59.25	420	61	2e-146
Target_name	Start	End	Length	Cov(%)
sp\|B9MYF1_POPTR	2	417	418	99.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12603.1	1	422	427	54.33	422	55	5e-138
Target_name	Start	End	Length	Cov(%)
AT5G36160.1	1	417	420	99.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold158	Augustus	mRNA	16620	18572	.	+	.	ID=Dca12603.1;Parent=Dca12603
scaffold158	Augustus	exon	16620	16906	.	+	.	ID=Dca12603.1.exon1;Parent=Dca12603.1
scaffold158	Augustus	exon	16993	17332	.	+	.	ID=Dca12603.1.exon2;Parent=Dca12603.1
scaffold158	Augustus	exon	17410	17628	.	+	.	ID=Dca12603.1.exon3;Parent=Dca12603.1
scaffold158	Augustus	exon	17864	17923	.	+	.	ID=Dca12603.1.exon4;Parent=Dca12603.1
scaffold158	Augustus	exon	18032	18187	.	+	.	ID=Dca12603.1.exon5;Parent=Dca12603.1
scaffold158	Augustus	exon	18275	18368	.	+	.	ID=Dca12603.1.exon6;Parent=Dca12603.1
scaffold158	Augustus	exon	18445	18572	.	+	.	ID=Dca12603.1.exon7;Parent=Dca12603.1