Carnation DB

Dca12676.1

Annotation

5-exons
f-1
sp|B9H204_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817748#GO:0016772#1F0P0C
sp|B9SFD0_RICCO#ATATH13, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1096420#GO:0016772#1F0P0C
Repeat List (scaffold1581)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12676.1	98	355	355	57.46	258	71	8e-115
Target_name	Start	End	Length	Cov(%)
sp\|B9H204_POPTR	290	579	635	45.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12676.1	98	355	355	54.08	258	67	4e-110
Target_name	Start	End	Length	Cov(%)
Os04t0660200-01	318	606	663	43.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1581	Augustus	mRNA	41702	44517	.	-	.	ID=Dca12676.1;Parent=Dca12676
scaffold1581	Augustus	exon	41702	41809	.	-	.	ID=Dca12676.1.exon1;Parent=Dca12676.1
scaffold1581	Augustus	exon	42385	42414	.	-	.	ID=Dca12676.1.exon2;Parent=Dca12676.1
scaffold1581	Augustus	exon	42510	42656	.	-	.	ID=Dca12676.1.exon3;Parent=Dca12676.1
scaffold1581	Augustus	exon	43396	43885	.	-	.	ID=Dca12676.1.exon4;Parent=Dca12676.1
scaffold1581	Augustus	exon	44225	44517	.	-	.	ID=Dca12676.1.exon5;Parent=Dca12676.1