Dca12679.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15811)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12679.1 |
284 |
424 |
430 |
16.27 |
141 |
48 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
916 |
1061 |
1501 |
9.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12679.1 |
35 |
296 |
430 |
18.83 |
262 |
31 |
1e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
650 |
1539 |
15.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15811 |
Augustus |
mRNA |
1671 |
4145 |
. |
- |
. |
ID=Dca12679.1;Parent=Dca12679 |
| scaffold15811 |
Augustus |
exon |
1671 |
2072 |
. |
- |
. |
ID=Dca12679.1.exon1;Parent=Dca12679.1 |
| scaffold15811 |
Augustus |
exon |
3255 |
4145 |
. |
- |
. |
ID=Dca12679.1.exon2;Parent=Dca12679.1 |
