Carnation DB

Dca12797.1

Annotation

5-exons
f-1
sp|A5ALS1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001578#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold159)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12797.1	270	940	971	32.74	671	42	2e-145
Target_name	Start	End	Length	Cov(%)
sp\|A5ALS1_VITVI	564	1319	1323	57.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12797.1	273	934	971	21.73	662	30	4e-84
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	683	1389	1401	50.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold159	Augustus	mRNA	20744	26025	.	+	.	ID=Dca12797.1;Parent=Dca12797
scaffold159	Augustus	exon	20744	21272	.	+	.	ID=Dca12797.1.exon1;Parent=Dca12797.1
scaffold159	Augustus	exon	21374	21650	.	+	.	ID=Dca12797.1.exon2;Parent=Dca12797.1
scaffold159	Augustus	exon	22341	23214	.	+	.	ID=Dca12797.1.exon3;Parent=Dca12797.1
scaffold159	Augustus	exon	24403	25530	.	+	.	ID=Dca12797.1.exon4;Parent=Dca12797.1
scaffold159	Augustus	exon	25918	26025	.	+	.	ID=Dca12797.1.exon5;Parent=Dca12797.1