Carnation DB

Dca12800.1

Annotation

5-exons
f-1
sp|B9RGM7_RICCO#RNA splicing protein mrs2, mitochondrial, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1442120#GO:0016020;GO:0046873#1F0P1C
Repeat List (scaffold159)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12800.1	1	176	176	85.22	176	71	5e-77
Target_name	Start	End	Length	Cov(%)
sp\|B9RGM7_RICCO	235	447	447	47.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12800.1	1	176	176	80.68	176	67	7e-73
Target_name	Start	End	Length	Cov(%)
AT1G80900.1	232	443	443	47.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold159	Augustus	mRNA	77402	78604	.	-	.	ID=Dca12800.1;Parent=Dca12800
scaffold159	Augustus	exon	77402	77632	.	-	.	ID=Dca12800.1.exon1;Parent=Dca12800.1
scaffold159	Augustus	exon	77982	78029	.	-	.	ID=Dca12800.1.exon2;Parent=Dca12800.1
scaffold159	Augustus	exon	78126	78244	.	-	.	ID=Dca12800.1.exon3;Parent=Dca12800.1
scaffold159	Augustus	exon	78348	78453	.	-	.	ID=Dca12800.1.exon4;Parent=Dca12800.1
scaffold159	Augustus	exon	78578	78604	.	-	.	ID=Dca12800.1.exon5;Parent=Dca12800.1