Carnation DB

Dca12802.1

Annotation

7-exons
f-1
sp|F6GU47_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g02080#GO:0005737;GO:0016783;GO:0008033#1F1P1C
sp|B9RIE1_RICCO#tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1578370#GO:0005737;GO:0016783;GO:0004808#2F0P1C
Repeat List (scaffold159)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12802.1	1	320	348	71.26	320	61	4e-133
Target_name	Start	End	Length	Cov(%)
sp\|F6GU47_VITVI	79	486	540	75.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12802.1	1	312	348	64.94	312	57	4e-115
Target_name	Start	End	Length	Cov(%)
AT1G51310.1	77	472	497	79.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold159	Augustus	mRNA	86325	90282	.	-	.	ID=Dca12802.1;Parent=Dca12802
scaffold159	Augustus	exon	86325	86702	.	-	.	ID=Dca12802.1.exon1;Parent=Dca12802.1
scaffold159	Augustus	exon	87005	87155	.	-	.	ID=Dca12802.1.exon2;Parent=Dca12802.1
scaffold159	Augustus	exon	87382	87533	.	-	.	ID=Dca12802.1.exon3;Parent=Dca12802.1
scaffold159	Augustus	exon	88331	88458	.	-	.	ID=Dca12802.1.exon4;Parent=Dca12802.1
scaffold159	Augustus	exon	88617	88674	.	-	.	ID=Dca12802.1.exon5;Parent=Dca12802.1
scaffold159	Augustus	exon	88880	88933	.	-	.	ID=Dca12802.1.exon6;Parent=Dca12802.1
scaffold159	Augustus	exon	90157	90282	.	-	.	ID=Dca12802.1.exon7;Parent=Dca12802.1